1 |
Introduction and Biological Databases |
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2 |
Rapid Database Search (Hashing) |
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3 |
Regulatory Motif Discovery (Combinatorial Search) |
Assignment 1 out |
4 |
Probabilistic Motif Finding (Gibbs Sampling) |
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5 |
Sequence Alignment (Dynamic Programming) |
Assignment 1 due |
6 |
Markov Chains and Hidden Markov Models |
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7 |
Gene Finding |
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8 |
Genome Evolution and Phylogenetic Trees |
Assignment 2 out |
9 |
Genome Duplication |
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10 |
Gene Expression Clustering |
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11-12 |
Gene Network and Inference |
Assignment 2 due |
13 |
Scale-free Networks |
Assignment 3 due |
14 |
Comparative Genomics |
Assignment 4 due |